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SM Virology

Long-Term Risk of Hepatocellular Carcinoma in Patients with Chronic Hepatitis B with Normal Alanine Aminotransferas

[ ISSN : 3067-9974 ]

Abstract Citation Introduction Patients and Methods Results Discussion Conclusion References
Details

Received: 20-Aug-2016

Accepted: 19-Sep-2016

Published: 30-Sep-2016

Blaise K Kutala1,2,3*, Emilie Estrabaud1 , Nathalie Boyer2,3, Corinne Castelnau³, Nathalie Giuily2,3, T Asselah1,3 and P Marcellin1,2,3

1Inserm UMR 1149-University Paris Diderot, France

2Réseau Ville-Hôpital (REVHEPAT), France

3Service d’hépatologie, Hôpital Beaujon, AP-HP, Clichy-France

Corresponding Author:

Blaise K Kutala, Inserm UMR

1149-University Paris Diderot, Réseau

Ville-Hôpital, Service d’hépatologie,

Hôpital Beaujon, France,

Abstract

Background: The Alanine Aminotransferase (ALT) level is considered as a risk factor for the progression to liver cirrhosis and Hepatocellular Carcinoma (HCC) in patients infected with Hepatitis B Virus (HBV) and remains a subject of debate.

Methods: We prospectively compared the incidence of HCC between HBV infected patients with normal ALT and those with elevated ALT.

Result: A total of 378 HBV-infected patients (102 with normal ALT and 276 with elevated ALT) were included. The median follow-up period was 8.2 years. The incidence rates of HCC development were significantly lower in the normal ALT patients than in patients with elevated ALT (0.55 vs 2.20 per 100 person-years, P = 0.021, while the incidence rates of hepatic decompensation (0.43 vs 1.23 per 100 person-years) and survival (53.8% vs 47.4% at 10 years) did not significantly differ between the two groups (Kaplan-Meir analysis). The main causes of death were on-hepatic diseases in patients with normal ALT. Multivariate Cox analyses model revealed that the risk of HCC was lower in patients with normal ALT than in patients with elevated ALT (hazard ratio (HR), 0.28, Confidence intervals (CI) (0.14-0.78)), while the risk of hepatic decompensation and mortality was the same in the two groups of patients.

Conclusion: The risk for HCC and liver decompensation normal ALT was markedly reduced in HBV-patients with normal ALT. Aged patients with HBV with normal ALT should therefore maintain long-term surveillance for HCC. Future studies aimed to better identify those with remaining long-term risk for HCC are needed.

Citation

Kutala BK, Estrabaud E, Boyer N, Castelnau C, Giuily N, Asselah T, et al. Long-Term Risk of Hepatocellular Carcinoma in Patients with Chronic Hepatitis B with Normal Alanine Aminotransferase. SM Virol. 2016; 1(2): 1009.

Introduction

Hepatitis B Virus (HBV) infection is a major risk factor for the progression to cirrhosis and Hepatocellular Carcinoma (HCC) worldwide [1]. Patients with liver cirrhosis have a higher risk of developing HCC than patients with less advanced fibrosis [2,3]. Patients with chronic HBV infection are at risk of developing adverse outcomes, including cirrhosis and (HCC), with an estimated lifetime risk of 25%-40% [4-6].

Several studies have identified HBV-related factors as key predictors of HCC development [7]. Hepatitis B Virus e Antigen (HBeAg) seropositivity [8,9], high viral load [10,11], and genotype C [12,13] are independent predictors of HCC development. In addition, hepatitis B viral load was found to be correlated with the risk of progression to cirrhosis [14]. Results from cohort studies have shown that a higher HBV DNA level is associated with a higher HCC risk [15]. However, in patients with an HBV DNA level <2000 IU/mL (low viral load), further categorized viral loads play an insignificant role in predicting HCC, and the HBsAg level becomes the only predictive biomarker [14,16,17]. More specifically, a higher HBsAg level (≥1000 IU/mL) is associated with a greater risk of HCC in HBV e antigen (HBeAg)-negative patients with low viral loads [18].

Since 1950s, serum Alanine Aminotransferase (ALT) levels were used as a surrogate marker for non-A, non-B hepatitis among blood donors before identifying Hepatitis C Virus (HCV) [19]. The importance of ALT levels in the progression of Hepatitis B Virus (HBV) infection remains not well investigated. However, Serum alanine aminotransferase level is a valid and sensitive indicator of liver-cell damage [20,21]. ALT is an important parameter for screening, diagnosis and follow-up of liver diseases [22,23]. The aim of this study was to prospectively evaluate the long term effect of ALT on the risk of developing HCC and liver decompensation in a cohort of 378 HBV patients.

Patients and Methods

Patients

The study population comprised naïve patients with compensated HBV infection who visited our hospital between January 2000 and December 2006. Cirrhosis was diagnosed on the basis of the results of histological examination or the combined results of clinical and imaging examinations. Patients should meet the following inclusion criteria: (i) positive serological test for HBsAg; (ii) absence of HCC at the time of presentation; (iii) naïve of HBV treatment and (iv) a follow up for more than 6 months after the liver biopsy or non-invasive liver tests. At the presentation, information on alcohol consumption habits was obtained through an interview conducted by the physicians.

T he exclusion criteria included other coexistent causes of chronic liver disease such as cirrhosis, positive anti-HCV, autoimmune hepatitis, primary biliary cirrhosis, primary sclerosing cholangitis, Wilson’s disease, hemochromatosis, and Budd-Chiari syndrome; presence of a habit of alcohol consumption together with HBV infection; Habitual drinking was defined as an average daily consumption of an amount equivalent to 40 g/day of pure ethanol for women and 60 g/day for men over a period of more than 4 years. a history of interferon therapy for HBV infection; and presence or history of HIV infection. Patients were enrolled at the time of diagnosis of presentation to care.

Here we used the HEPALIST cohort, a large population of patients admitted for care in Beaujon Hospital (Paris area, France). We extracted 617 treatment-naïve patients with HBV infection and evaluated the effect of normal ALT or elevated ALT on the occurrence of HCC and hepatic decompensation. The study protocol conformed to the ethical guidelines of the 1964 Declaration of Helsinki revised at 2013 and French legislation and informed consent was obtained from each patient at the presentation.

Serological tests and serums quantification

Serum samples at enrollment were routinely tested for viral markers including HBsAg, HBeAg, anti-HBc, anti-HBs and anti-HBe using standard procedures (AXSYM system, Abbott, France). Serum ALT measurements were performed on a Hitachi 911 automat using Boehringer–Mannheim reagents. The threshold of 40 IU/l was used as the upper normal range. This threshold, given by the manufacturer, was calculated as the mean ±2 SD value obtained from a control population.

The HBV DNA in the serum was routinely determined with the Versant HBV DNA Assay (bDNA) (Bayer, France) with a sensitivity of 8×105 HBV copies/ml for patients enrolled before 2001. After 2001, serum HBV DNA quantification was performed by PCR according to the manufacturer’s instructions (CobasAmplicor HBV MONITOR) (Roche Diagnostics Systems, Meylan, France). The assay is based on amplification of a known standard amount added to each test tube. T he sensitivity of the assay is 200 copies/ml.

Surveillance

The standard surveillance was made for all patients including laboratory tests every 1-3 months, imaging examinations with abdominal ultrasonography using a high-resolution and real-time scanner for HCC surveillance, and upper endoscopy every 6-12 months or at the time of upper digestive hemorrhage for patient with advanced disease. All patients were tested for serological markers (HBsAg, HBeAg, anti-HBe, antibodies against HCV [anti-HCV], and antibodies against HDV [anti-HDV]) and had liver function tests performed and α-Fetoprotein (AFP) levels measured at baseline. T hroughout the follow-up period, if the Alanine Aminotransferase (ALT) levels remained within normal limits, liver enzyme and AFP levels were assayed every 6 months and, if the ALT levels were elevated, at least every 3 months. Serum samples collected at each visit were stored at -20°C until analysis.

Treatments

Patients were considered for treatment when they had HBV DNA levels above 2000 IU/ml, serum ALT levels above the Upper Limit of Normal (ULN) and advanced liver disease assessed by liver biopsy (or two non-invasive markers once validated in HBV infected patients) showing moderate to severe active necroinflammation and/ or at least moderate fibrosis according Metavir Score. However, in patients who fulfill the above criteria for HBV DNA and histological of advanced liver disease, treatment may be initiated even the ALT levels are persistently normal and HBVDNA levels ≥5.0 log copies/ ml. Hepatocellular carcinoma was treated by surgical resection, percutaneous radiofrequency ablation, percutaneous ethanol injection, or transcatheterarterial chemoembolization, depending upon the stage of HCC and liver function.

Prognostic factors

The following variables were assessed as potential predictors of HCC, hepatic decompensation, and mortality: age, sex, aspartate aminotransferase level, albumin level, total bilirubin level, total cholesterol level, platelet count, α-fetoprotein level, diabetes mellitus (presence or absence), HBV-DNA level and Prothrombin time. Diabetes mellitus was diagnosed on the basis of the history of medical treatments for the disease or fasting blood glucose levels (126 mg/dL or more).

Diagnosis of HCC, Follow-up, and Endpoints of the Study

Hepatocellular carcinoma was diagnosed on the basis of the results of histological examinations or typical findings of imaging examinations conducted using contrast agent early enhancement during the arterial phase and washout during the delayed phase in combination with alpha-fetoprotein serum. Hepatic decompensation was defined as one or more of the following manifestations: ascites, jaundice (serum bilirubin level, ≥3 mg/dL), hepatic encephalopathy, or rupture of gastro esophageal varices. Ascites was diagnosed by physical and imaging examinations. Hepatic encephalopathy was diagnosed on the basis of clinical examination and the results of the physical and laboratory examinations. Rupture of gastro esophageal varices was confirmed by endoscopy. For patients who were no longer being followed up, complementary data on HCC, hospitalizations due to liver-related causes, or death, were retrieved from registries concerning follow-up information or by contacting the patient himself or his primary care physician.

Statistical analyses

Continuous variables are presented as mean (SD) or median (range) and categorical variables as frequencies (percentages). Two tests were used: Student t test and χ2 test. The effect of age (50-59 vs 60 vs <50 years), albumin level, diabetes (presence or absence), gender (male vs female), HBV genotype (genotype D vs genotype non D), total bilirubin level, total cholesterol level, platelet HR=1 using Wald tests. All tests were 2-sided and a P value of <.05 was considered statistically significant. Data analysis was performed with SAS 9.3 software (SAS Institute, Cary, North Carolina).

Results

A total of 378 patients with HBV infection were enrolled and followed up for up to 8.4 years (mean, 6 [SD, 2.8] years), consisting of 102 patients with persistent normal ALT and 276 patients with elevated ALT level. The occurrence of HCC was 4 (3.9%) and 19 (6.9%), respectively. Characteristics and data from the 378 patients are summarized in Table 1.

Table 1: Baseline Characteristics of 378 patients according ALT serum level.

  Normal ALT Elevated ALT  
Characteristics All (n=378) n=102 n=276 P-value
Men 249 70 (69%) 179 (65%) 0.328
Age (Median) 51 [43-63] 49 [43-57] 54 [45-63] 0.022
BMI (kg/m2) 25 25 [23-27] 25 [22-29] 0.105
History Alcohol 58 (15%) 14 (14%) 46 (24%) 0.072
Diabetes 38 (10%) 8 (8%) 30 (11%) 0.469
Albumin (g/l) 42 [38-45] 42 [39-44] 41 [38-45] 0.071
AFP(μg/l) 7 [4-12] 8 [5-12] 7 [4-12] 0.239
Bilirubin (µmol/l) 16 [10-16] 15 [10-18] 16 [12-20] 0.056
Platelets (x109/L) 157 [134- 159 [145- 156 [134- 0.043
207] 207 187]
Prothrombin (%) 82 [69-92] 83 [78-92] 81 [69-94] 0.065
HBV-DNA (log copies/ml) 3,9 [3-5] 3,3 (3-5) 4,2 (2,7-6) 0.122
Genotype D 170 (45%) 68 (67%) 144 (52%) 0.03
Genotype non-D 208 (55% 34 (33%) 132 (48%)  
F1-2 309 (82%) 86 (84%) 219 (79%) 0,085
F3-4 73 (19%) 16 (16%) 57 (21%)  
Total cholesterol (g/l) 1,7 [1,2-2,9] 1,6 [1,1-2,2] 1,7 [1,0-2,9] 0.044

Data are presented as No. (%) unless otherwise specified.

Abbreviations: IQR: Interquartile Range; BMI: Body Mass Index was calculated as weight divided by height squared (kg/m2); SD: Standard Deviation; Statistically significant (P < .05).

Incidence of HCC

Four (3,9%) of the 102 patients with persistent normal ALT developed HCC during follow-up (after mean 6.4 [SD, 2.3] years of follow-up), corresponding to an incidence of 0.55 per 100 person years (PY; Table 2).

Table 2: Incidence Rates of HCC and hepatic decompensation and overall death per 100 Person-Years for patient with normal ALT and for those with elevated ALT Person-Time.

  Normal ALT Elevated ALT (Normal ALT vs Elevated ALT)
Endpoints Event PY Rate Events PY Rate HR (CI95%) P value
Any events 7 734 0.91 31 1017 3.04 0.42 (0.16-0.98) 0.001
HCC 4 721 0.55 19 867 2.2 0.28 (0.14-0.78) 0.021
HD 3 692 0.43 13 1003 1.29 0.38 (0.11-0.88) 0.037
Death/LT 4 734 0.52 22 1017 2.16 0.33 (0.18-0.68) 0.002

HD: Hepatic Decompensation; PY: Person-Year; LT: Liver Transplantation and CI95% : Confidence Intervals; Hazard ration for normal ALT vs elevated ALT serum.

HCC was diagnosed in 1 patient within 2 year after enrollment (19 months), and the other 3 at 5.6, 7.4, and 7.6 years in patients with normal ALT. ALT serum level was tested at the diagnosis of HCC in 3 of these patients, and they were all under the limit of detection. Among the 4 patients with HCC who had normal ALT, all were male, 3 had diabetes mellitus, and 1 had history of alcohol abuse. Three patients had genotype D and 1 had non-genotype D; the incidence rate for HCC was significantly higher in elevated ALT person-time with 2.20 per 100 PY as compared to normal ALT time (0.55 per 100 PY). Only age and sex were found to be baseline factors significantly affecting the incidence of HCC (age 50-59 vs 60 vs <50 years: HR, 3.32 [95% CI, 1.48-7.90], P = 0.007; male vs female: HR, 2.09 [95% CI, 1.06-4.62], P = 0.014).

Hepatic decompensation

In patients with normal ALT, 3 (2.9%) developed ascites, none hepatic encephalopathy, and none variceal bleeding during follow-up. Ascites was diagnosed 5.3, 6.1 and 7.2 years following the enrollment. One of these patients developed HCC, all were males, and none had diabetes mellitus. However, all these patients had advanced liver disease at the time of inclusion. The risk of developing any hepatic decompensation was significantly lower in normal ALT time than in elevated ALT person-time HR, 0.50 [95% CI, 0.11-0.88], P = 0.037.

The Figure 1 shows the cumulative risk of any event (HCC and any hepatic decompensation). The incidence rate for normal ALT time and elevated ALT person-time was 0.91 and 3.04 per 100 PY, respectively. The risk for any event was significantly lower in normal ALT person-time compared to elevated ALT person-time (P = 0.012).

Overall deaths

Three (3%) patient with normal ALT died during follow-up, one died from liver-related cause with HCC. The cause of death for the other 2 patients underwent liver transplantation. Twenty-two (8%) patient’s died in the group of patients with elevated ALT. The causes of liver complications related were reported in 7 patients and other causes for 5 patients. Thus, 14 patients (4%) underwent liver transplant. The incidence rate for overall death was 0.52 per 100 PY in patients with normal ALT patients. Significantly lower incidence rate for overall death was seen in normal ALT with 0.52 per 100 PY, compared to 2.16 per 100 PY in elevated ALT person-time (P = 0.002).

During the follow-up period, 4 (3.9%) patients with normal ALT and 44 (7.9%) patients with elevated ALT died due to all causes. The cumulative survival rates were significantly different between the two groups (Figure 1) : 97.8% and 92.8% in patients with normal ALT and 98.4% and 78.4% in patients with elevated ALT at 5 and 10 years, respectively (Figure1).

Figure 1: Cumulative survival rates of HBV patients (Kaplan Meier method) according ALT levels. The survival rates of the normal ALT patients were significantly higher than those with elevated ALT (P = 0.011).

Discussion

In this study, a total of 378 HBV-infected patients were followed for a median of 8.2 years. We evaluate the impact of normal ALT on the risk to develop HCC, hepatic decompensation and overall death. T his prospective cohort is to our knowledge the largest of HBV infected patients with or without normal ALT in European countries. We found that normal ALT reduced the risk of HCC around 28% per year and this risk remained over 5 years, but on a lower level. This highlights the fact that surveillance for HCC needs to be maintained during long-term, also in patients with or without normal ALT [22]. This is further strengthened by the fact that all patients who died from liver-related causes in normal ALT group after had developed HCC. On the other hand, the frequency and method of surveillance remain debated. Furthermore, the long-term effectiveness and cost effectiveness of surveillance for HCC in these patients requires further studies [22].

Longitudinal studies of untreated patients with chronic HBV indicate that, after diagnosis, the 5-year cumulative incidence of developing cirrhosis ranges from 8% to 20%. The 5-year cumulative incidence of hepatic decompensation is approximately 20% for untreated patients with compensated cirrhosis [6,24]. The risk of liver complications and HCC may differ in cirrhotic and non-cirrhotic patients [25]. Probably cirrhotic (F4) patients more often develop HCC than F3 or F0-F2 patients [11,26]. Actual data indicates that the HCC incidence is at least 0.2% per year in non-cirrhosis patients [27]. Whereas HCC incidence ranges from 0.1% to 0.4%/year in Western European patients with chronic HBV infection [28].

Previous studies on the impact of normal ALT have often suffered from a retrospective design, included relatively few cirrhotic patients with normal ALT and suffered from short follow-up periods and/or significant loss of patients during follow-up [29,30]. The effect that normal ALT has on HCC has therefore yielded diverging results on the reduction of the risk of developing HCC [31]. Only one study has shown a positive association between the aminotransferase concentration, even within normal range (35-40 IU/l), and mortality from liver disease. The risk of liver cancer and liver related death were 2.9 (2.4 to 3.5) in men and 3.8 (1.9 to 7.7) in women for ALT concentration around 20 IU/l [21].

In one retrospective study, including Asian-American patients with both F3 and F4 patients with a mean follow-up time of 3.5 years, the proportions of those with significant histology were 0, 22, and 45% for age < or = 35, 36-50, and >50 years, respectively (n=11, n=27, n=19; P=0.033). In patients who had fluctuating ALT levels, the corresponding proportions were 22, 42, and 69% (n=9, n=22, n=13; P=0.091) [32]. Proportions of patients with advanced liver disease in this study seem close to our finding. However, this study did not evaluate the same endpoints such HCC and hepatic decompensation.

A significantly lower incidence of liver-related complications and liver-related deaths in patient with persistent normal ALT has been noted in several studies [6,33], similar to our study. In meta-analyses with pooled data from both Asian and Western European studies, a reduced risk of HCC, liver-related morbidity, and mortality has been seen in patients with normal ALT [31,34]. The risk for overall death was also significantly reduced in patients with normal ALT in our study, with a majority of non–liver related deaths.

A common problem in studies with long follow-up is the frequent loss of patients during follow-up. In the present study, dropouts were very few (0.7%) and it was the reason why that information according death was not reported for all patients with elevated ALT serum. In this study, we do not have sequential measurement of Hepatitis B virus e antigen (HBe-Ag) at the occurrence of HCC. The importance of HBe-Ag in fibrosis progression with vanishing cirrhosis was not be assessed in our study [35,36]. In addition, the correlation between hepatitis B viral load with the risk of progression to cirrhosis [3,37] and the remaining long-term risk for HCC was not analyzed.

Conclusion

To conclude, we found a reduced but persistent long-term risk of developing HCC in HBV patients with normal ALT. This risk persisted during at least 7 years of follow-up in some patients. This indicates that continued surveillance for HCC should be maintained during several years of follow-up.

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Effects of Antiviral Treatment on Chronic Hepatitis B-Related Hepatocellular Carcinoma and Recurrence after Surgical Treatment

Hepatocellular Carcinoma (HCC) is one of the most common and aggressive malignancies, and the high rate of recurrence is a major obstacle to improving prognosis. Chronic Hepatitis B Virus (HBV) is one of the major causes of HCC, and high viral replication rate and related hepatic inflammation are major risk factors of HCC recurrence after surgical resection. Current approved antiviral medications for the treatment of chronic hepatitis B are interferon-α (IFNα) and nucleos (t) ide analogues (NAs), including lamivudine, adefovir dipivoxil, telbivudine, entecavir, and tenofovir disoproxil fumarate. IFNα treatment significantly reduces HBV-related HCC in sustained responders, but its usage is limited by adverse effects. NAs treatment significantly reduces disease progression into cirrhosis and thus HCC incidence, especially in HBV e antigen-positive patients. However, the long-term continuous treatment of NAs may result in drug resistance due to viral mutations. The effect of IFNα treatment on HCC recurrence remains controversial, while evidence has suggested that postoperative NAs therapy can improve both recurrence-free survival and overall survival in patients with HBV-related HCC. There is a great need to develop more effective and affordable new agents with a better safety record. More high-quality prospective trials are needed to quantitatively estimate treatment efficacy and identify predictive factors of HCC development and progression.

Xiaomei Hou1, Jue Wang2 and Yan Du2*


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Advances in GCRV Research: Virus Molecular Type and Immunogen

Grass carp reovirus, GCRV, belongs to the genus Aquareovirus (AQRV). It is the most virulent species of AQRV, and infection by GCRV causes hemorrhagic disease in grass carp. A new strain, GCRV-GD108, was found in China. Significant differences were found between GCRV-GD108 and GCRV as well as between GCRVGD108 and other known AQRVs. Moreover, similarities were found between GCRV-GD108 and Orthoreovirus (ORV), suggesting a closer evolutionary relationship between GCRV-GD108 and ORV than between GCRVGD108 and the known AQRVs. The discovery of different virus molecular types of GCRV indicates the importance of molecular diagnosis and the development of a specific vaccine. Vaccines have been developed that include inactivated tissue vaccines, inactivated cell vaccines, and attenuated viral vaccines. Great efforts have been made in recent years to investigate immunogen for the preparation of genetically engineered vaccines, which are expected to provide protection for the cultured grass carp.

Xing Ye*and Yuan-yuan Tian


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The Power of GPR for Predicting Liver Fibrosis and Cirrhosis May Be Affected By Different Scoring Systems of Liver Fibrosis in Patients with Chronic Hepatitis B

We read with interest the article by Maud Lemoine et al [1] recently published in Gut. They found that Gamma-Glutamyl Transpeptidase (GGT)-to-Platelet Ratio (GPR) may be acted as a simple, non-invasive and inexpensive alternative to liver biopsy and Fibro scan laboratory model in sub-Saharan Africa. The GPR was significantly better than Aspartate Transaminase-To-Platelet Ratio Index (APRI) [2] and Fib-4 (based on age, ALT, AST and platelet count) [3] in predicting liver extensive fibrosis (≥F2) and cirrhosis (≥F4) in patients with Chronic Hepatitis B (CHB) in the Gambia and Senegal, but not in France. So we hypothesized that the predictive efficiency of these 3 markers may be heterogeneous in different race.

Xueping Yu1,2, Jiming Zhang2* and Zhijun Su1*


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Vital Role of Phylogenetic Analysis as Evidence in Illegal Investigation of Virus Transmission

During recent years phylogenetic analysis has become progressively popular as a tool for the criminal investigation of viral transmission, where it is used to derive the ancestral relationships of viral infections from sampled genome sequences. It has been used to cases involving the transmission of the fast-evolving human immunodeficiency virus (HIV) [1], Hepatitis B Virus (HBV) [2,3], hepatitis E (HEV) [4] and for tracking viral transmission in animal field. For example, for the first time phylogenetic analysis determined that the source of viral disease in aquaculture [5,6,7]. Aspects of the transmission of these viruses are impressed on the genetic variation of genomes [8]. These data revealed information about the patterns of virus emergence, viral epidemiology and evolutionary dynamics [9,8]. Analysis of molecular phylogenetic relationships must be based on a domain with a suitable level of evolution for the issue under investigation. Evaluation of recent transmission events requires the analysis of fast-evolving regions, whereas older events must be studied by sequencing more stable regions [2]. This analysis investigates small difference in virus genome using computational methods to calculate the variation between strains of viruses. This process is a critical complex scientific process which undertaken by virologist. The result of phylogenetic analysis has recently applied in illegal trials as evidence of responsibility for virus transmission [10]. In these events, the expert analysis of virologist has been discovered to be of critical importance. In the other hand, these trials can be applied to acquit individuals and keep out the possibility that defendant was responsible for virus transmission [10,11,8]. It is important to note that molecular analysis cannot prove the transmission virus between two individual, but it can support any information on the direction of that transmission [10,1]. It is necessary for molecular phylogenetic analysis to use the right comparison samples, because inappropriate samples could overstate the relationship between two viruses (of different geographical origin) as being conspicuously unique. In addition, many viruses frequently recombine and cause further opportunity for genetic novelty viral transmission from data commonly based on phylogenetic analysis [8]. Also, models of virus transmission and early diversification are the most important result of phylogenetic study. For example, Zika virus emerged in Africa and now circulates on all inhabited continents [12,13]. In another study demonstrated that isolated Dengue virus type 1 strain from Indonesia has a close phylogenetic relationship with strains of Japan [14]. In the recent decade, phylogenetic studies have matured with focus on the human RNA viruses such as influenza virus, HIV, dengue virus and HCV [8-10,15]. However, there are wide ranges of viruses to which phylogenetic analysis are used [9,16-18]. This review shortly outlines the importance of phylogenic analysis for viral transmission with focus on virus origin and shows phylogenetic approach to identify ecological and biological of virus transmission.

Maryam Dadar*


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Serosurveillance of Foot-and-Mouth Disease in Ruminant Population of Karnataka, India

Foot-and-Mouth Disease (FMD) is endemic in India and three serotypes viz, O, A, and Asia-1are prevalent in the country. In the current study a total of 7923 serum samples were collected randomly from 4639 cattle, 1363 buffaloe, 1187 sheep and 734 goats from different districts of Karnataka state, India. The samples were screened for antibodies against Non-Structural Proteins (NSPs) and Structural Proteins (SPs) of FMD virus to gather evidence with respect to the FMD virus circulation. The study revealed NSP antibodies in 33% bovines and 16% small ruminants. Higher level of NSP antibodies was observed in cattle (35%), buffaloes (27%), goats (23%) and lower prevalence in sheep (12%).The antibodies against SP was observed in 78% bovines and 18% small ruminants. The study reiterates the importance of strengthening of FMD surveillance in small ruminants as they could pose a potential risk of virus transmission to cattle.

Raveendra Hegde1*, Madhusudan Hosamani2 , Sreevatsava V1 , Rashmi KM1 , Srikanth Kowalli1 , K Nagaraja1 , NK Dharanesha1 , CM Seema1 , GV Nagaraj1 , K Srikala1 , KJ Sudharshana1 , SheshaRao1 , Rajashekar B1 , P Giridhara1 , and SM Byregowda1


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Discovery and Roles of Virus-Encoded RNA Silencing Suppressors

RNA silencing is a general surveillance system in plants and animals which could protect hosts from virus infection. However, many virus species survived by expressing a series of proteins named as RNA Silencing Suppressors (RSSRs) to counteract this defense system. This review elaborated the newly discovered RSSRs encoded by virus including the recently discovered polymerase slippage product and some newly-identified RSSRs in mammalian cells. This review will also provide a comprehensive understanding of the role of RSSRs during the virus infection, especially with regard to its newly identified function in epidemic modification in hosts.

Ma Lin*


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Zika and Its Preparedness in Nepalese Scenario

Zika virus came to known to public in 1947, when it was first isolated from a Rhesus monkey from Uganda [1-3]. Due to its unremitting spread in past decade, zika virus created havoc and gained its recognition as one of the prominent threat in public health across the globe [4-7]. In the March of 2015, Brazil confirmed its first zika infection. Following the zika cases, country had to face erupted increment in microcephaly cases [8]. In next nine month span, the cases of microcephaly increased from 150 cases to 400. After observing this trend, PAHO (Pan American Health Organization) issued an epidemiological alert on December 1st 2015, warning a suspected link between Zika and microcephaly [9].

Bishnu Prasad Upadhya1, Rajani Malla1, Krishna Das Manandhar1, Birendra Prasad Gupta2*, Anurag Adhikari2 , Ramanuj Rauniyar3, Chirik Shova Tamarkar4 , Bimlesh Kumar Jha5 and Roshan Kurmi6


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LncRNA: A Rising Star in Virus-Host Cross-Talk during HIV-1 Infection

The Human Immunodeficiency Virus (HIV) is a retrovirus that has been aroused worldwide concern, due to its chronic and persistent infection, ultimately leading to a causal result of Acquired Immunodeficiency Syndrome (AIDS). Long noncoding RNAs (lncRNAs) are non-protein coding transcript longer than 200 Base Pairs (bp) and being considered to be key regulators that involved in various biological processes, such as chromatin modification, transcriptional regulation, post-transcriptional regulation, intracellular trafficking and etc. What deserves to be noticed is that lncRNAs are recently being reported to link with viruses closely, and lncRNAs are differentially expressed after a variety of virus infections, including HIV-1 infection. In this paper, we review the rapidly advancing field of lncRNAs, focus on the current progress of lncRNAs in HIV-1 infection, and briefly discuss their different roles in host gene regulation and viral replication during the establishment or maintenance of viral latency. Interestingly, lncRNAs may emerge as novel biomarkers of antiviral drugs and provide potential targets for new therapeutics of AIDS.

Liujun Chen1 , Shanshan Xu1 , Luoshiyuan Zuo3 , Song Han1,2, Jun Yin1,2, Biwen Peng1,2, Xiaohua He1,2 and Wanhong Liu1,2*


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Fungal Viruses: Promising Fundamental Research and Biological Control Agents of Fungi

Fungal viruses (mycoviruses) exist in all major groups of fungi. The primary focus of this review is viruses of filamentous fungi, especially plant pathogens, with emphasis on the molecular characterization of fungus-virus interactions. There are two main hypotheses about the origin of mycoviruses isolated from plant pathogenic fungi. The origin of these mycoviruses may be ancient but they may also have evolved from plant viruses. Many characterized mycoviruses are in unencapsidated dsRNA forms without any coat protein in fungi. Mycoviruses are efficiently spread in two ways, vertically by spore formation and horizontally via hyphal fusion. Replication cycle of RNA mycoviruses doesn’t have the extracellular route of infection under natural conditions. Typically, fungal infections cause no obvious phenotypic alterations. Although the interaction of mycoviruses and their host is largely limited, those aspects including the transcriptional profiling and RNA silencing are of help to understand the co-existence mechanism of virus and fungi. Mycoviruses are potential agents of biological control of important plant pathogenic fungi.

Shuangchao Wang1,2, Marc Ongena2 , Dewen Qiu1 and Lihua Guo1*